Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00124Hypothetical protein. (41 aa)    
Predicted Functional Partners:
D920_00123
Replication-associated protein RepB family protein; KEGG: ccm:Ccan_17350 1.2e-11 Sporulation initiation inhibitor protein soj K03496; Psort location: Cytoplasmic, score: 7.50.
       0.906
D920_00125
Hypothetical protein; KEGG: efc:EFAU004_p1038 1.2e-79 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97.
       0.601
D920_00012
Hypothetical protein; KEGG: lbi:LEPBI_II0025 6.8e-07 ATPase, ParA family K03496.
       0.524
D920_00298
Hypothetical protein; KEGG: ccm:Ccan_17350 2.1e-18 Sporulation initiation inhibitor protein soj K03496; Psort location: Cytoplasmic, score: 7.50.
       0.524
D920_00342
KEGG: ccm:Ccan_17350 9.5e-69 Sporulation initiation inhibitor protein soj K03496; Psort location: CytoplasmicMembrane, score: 8.78.
       0.524
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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