Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00155Addiction module toxin, RelE/StbE family; KEGG: hip:CGSHiEE_07380 0.00026 glyS; glycyl-tRNA synthetase subunit beta K06218. (89 aa)    
Predicted Functional Partners:
D920_00154
Hypothetical protein.
     
 0.999
D920_00202
Addiction module antitoxin, RelB/DinJ family; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.989
D920_02727
Prevent-host-death family protein; KEGG: tgr:Tgr7_1341 0.0038 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.954
D920_02933
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.954
D920_02296
Metallo-beta-lactamase domain protein; KEGG: efi:OG1RF_10969 7.1e-112 beta-lactamase; Psort location: Cytoplasmic, score: 7.50.
     
 0.920
D920_02045
DNA-binding helix-turn-helix protein; KEGG: sgg:SGGBAA2069_c10720 0.0057 transcriptional regulator.
     
 0.906
D920_01929
Nucleotidyltransferase domain protein; KEGG: gfo:GFO_1722 2.2e-07 nucleotidyltransferase K07075.
 
   
 0.886
D920_01718
HNH endonuclease domain protein; KEGG: sds:SDEG_1118 5.6e-16 endodeoxyribonuclease.
     
 0.885
D920_00203
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.884
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
     
 0.870
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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