Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00170KEGG: efu:HMPREF0351_12882 7.5e-108 PTS system transporter subunit IIC K02795; Psort location: CytoplasmicMembrane, score: 10.00. (259 aa)    
Predicted Functional Partners:
D920_00169
Mannose permease IID component domain protein; KEGG: efu:HMPREF0351_12883 1.1e-72 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
D920_00171
PTS system mannose-specific EIIAB component domain protein; KEGG: efu:HMPREF0351_12881 5.6e-64 PTS family mannose/fructose/sorbose porter component IIB K02794; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.998
D920_01380
KEGG: efu:HMPREF0351_10772 2.0e-153 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
D920_01382
Putative PTS system mannose-specific EIIAB component; KEGG: efu:HMPREF0351_10770 1.1e-159 manX; PTS family mannose/fructose/sorbose porter component IIAB; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.998
D920_01614
Putative mannose permease IID component; KEGG: sgo:SGO_1890 1.2e-61 PTS system fructose(mannose)-specific transporter subunit IID K02771; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
D920_03019
KEGG: efu:HMPREF0351_12240 6.1e-122 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
D920_03021
KEGG: efc:EFAU004_02258 3.8e-65 PTS system, mannose/fructose/sorbose-specific IIB component K02794; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.998
D920_00172
KEGG: efu:HMPREF0351_12880 1.2e-36 PTS system mannose/fructose/sorbose transporter subunit IIA K02793; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.997
D920_00244
KEGG: efu:HMPREF0351_12883 1.8e-42 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 9.55.
 
 
 0.997
D920_02281
KEGG: efc:EFAU004_01943 5.5e-121 PTS system, mannose/fructose/sorbose-specific IID component K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.996
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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