Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00182ABC transporter, ATP-binding protein EcsA; KEGG: efi:OG1RF_10426 1.5e-102 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 8.78. (245 aa)    
Predicted Functional Partners:
D920_00183
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.999
D920_00181
Protein hit; KEGG: efc:EFAU004_02524 6.1e-58 histidine triad protein K02503; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.998
D920_00180
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.93.
  
    0.995
D920_00184
Phosphotransferase enzyme family protein; KEGG: efc:EFAU004_02521 2.6e-121 Phosphotransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.995
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.993
D920_00186
KEGG: pfe:PSF113_0439 1.7e-32 xcpR; protein XcpR K02454; Psort location: Cytoplasmic, score: 9.89.
 
   
 0.985
D920_00187
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 0.00015 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.981
D920_02213
ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_2056 3.9e-230 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.977
prsA
Putative foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
 
   
 0.961
D920_00271
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.949
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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