Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_00191Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 7.50. (160 aa)    
Predicted Functional Partners:
D920_00192
DNA-binding helix-turn-helix protein; KEGG: mpx:MPD5_0532 1.8e-10 SOS-response repressor and protease LexA; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.968
D920_01488
DNA-binding helix-turn-helix protein; KEGG: cce:Ccel_3317 9.2e-08 XRE family transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.935
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
       0.920
D920_00190
Hypothetical protein; Psort location: Extracellular, score: 8.91.
       0.912
D920_00189
Hypothetical protein.
  
  
 0.896
D920_00129
Hypothetical protein.
     
 0.892
D920_00549
KEGG: apb:SAR116_1706 4.7e-12 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.874
D920_02044
DNA-binding helix-turn-helix protein; KEGG: clj:CLJU_c36670 7.4e-10 transcriptional regulator; K01356 repressor LexA.
 
  
 0.867
D920_00188
Resolvase protein; KEGG: apb:SAR116_1288 3.1e-09 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
       0.866
D920_00730
DNA-binding helix-turn-helix protein; KEGG: sgg:SGGBAA2069_c10720 0.0057 transcriptional regulator.
  
  
 0.846
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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