Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
D920_00214Hypothetical protein. (224 aa)    
Predicted Functional Partners:
D920_00217
Peptidase, M23 family; KEGG: efu:HMPREF0351_12843 1.6e-185 lysozyme; Psort location: CytoplasmicMembrane, score: 9.55.
       0.917
D920_00215
Hypothetical protein; KEGG: apo:Arcpr_1638 0.0099 ATP synthase H subunit; K02121 V-type H+-transporting ATPase subunit E.
       0.876
D920_00510
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.646
D920_01121
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.646
D920_01947
Conjugal transfer family protein; Psort location: CytoplasmicMembrane, score: 8.16.
       0.646
D920_00240
Hypothetical protein; KEGG: sgg:SGGBAA2069_c20480 5.3e-25 CHAP domain-containing protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.628
D920_00391
Peptidase, M23 family; KEGG: sgg:SGGBAA2069_c20480 1.6e-55 CHAP domain-containing protein; Psort location: Extracellular, score: 9.60.
       0.628
D920_02810
LysM domain protein; KEGG: efl:EF62_0621 2.7e-10 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein.
       0.628
D920_00213
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.413
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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