Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_00217Peptidase, M23 family; KEGG: efu:HMPREF0351_12843 1.6e-185 lysozyme; Psort location: CytoplasmicMembrane, score: 9.55. (400 aa)    
Predicted Functional Partners:
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
  
  
 0.996
D920_02148
Muramidase-2; KEGG: efc:EFAU004_02584 5.0e-269 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
 
  
 0.993
D920_02449
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: efc:EFAU004_01007 5.5e-128 N-acetylmuramoyl-L-alanine amidase; Psort location: CytoplasmicMembrane, score: 8.77.
  
  
 0.991
D920_02606
LysM domain protein; KEGG: scp:HMPREF0833_11456 7.4e-09 isaA; immunodominant antigen A; Psort location: Extracellular, score: 9.13.
 
  
 0.988
D920_01512
NlpC/P60 family protein; KEGG: efc:EFAU004_00439 2.9e-46 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
 
  
 0.987
D920_00307
Phage tail component protein.
  
    0.986
D920_01294
N-acetylmuramoyl-L-alanine amidase; KEGG: llt:CVCAS_0201 8.7e-67 yccB; glycoside hydrolase family protein.
  
  
 0.978
D920_01583
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: llt:CVCAS_0201 3.3e-50 yccB; glycoside hydrolase family protein; Psort location: Extracellular, score: 9.73.
  
  
 0.978
D920_00601
KEGG: efc:EFAU004_02112 8.3e-102 N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cellwall, score: 8.75.
  
  
 0.977
D920_00009
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.976
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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