Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00246Sigma-54 interaction domain protein; KEGG: ppo:PPM_0442 5.0e-95 levR; transcriptional regulatory protein levR; Psort location: Cytoplasmic, score: 9.97. (938 aa)    
Predicted Functional Partners:
D920_00630
KEGG: ehr:EHR_08380 1.2e-171 RNA polymerase factor sigma-54; Psort location: CytoplasmicMembrane, score: 8.16.
 
 
 
 0.998
D920_01382
Putative PTS system mannose-specific EIIAB component; KEGG: efu:HMPREF0351_10770 1.1e-159 manX; PTS family mannose/fructose/sorbose porter component IIAB; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.996
D920_00244
KEGG: efu:HMPREF0351_12883 1.8e-42 PTS system mannose/fructose/sorbose transporter subunit IID K02796; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.992
D920_00245
SIS domain protein; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid.
 
    0.990
D920_01597
Putative PTS system, lactose-specific IIC component; KEGG: eat:EAT1b_1051 3.7e-202 PTS system lactose/cellobiose family transporter subunit IIC; K02787 PTS system, lactose-specific IIB component K02788; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.982
D920_03022
KEGG: efc:EFAU004_02259 2.7e-41 PTS system, mannose/fructose/sorbose-specific IIA component K02793; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.979
D920_00172
KEGG: efu:HMPREF0351_12880 1.2e-36 PTS system mannose/fructose/sorbose transporter subunit IIA K02793; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.975
D920_00715
Putative 6-phospho-beta-glucosidase; KEGG: efc:EFAU004_02005 1.6e-231 alpha-galactosidase K01222; Psort location: Cytoplasmic, score: 7.50.
     
 0.973
D920_03021
KEGG: efc:EFAU004_02258 3.8e-65 PTS system, mannose/fructose/sorbose-specific IIB component K02794; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.971
D920_01615
KEGG: lsl:LSL_1950 1.2e-36 PTS system, mannose-specific IIC component K02796; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.965
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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