Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_00248Hypothetical protein. (340 aa)    
Predicted Functional Partners:
D920_00319
Hypothetical protein; KEGG: efi:OG1RF_12452 9.3e-23 ubiD; UbiD family decarboxylase.
 
     0.971
D920_00249
Hypothetical protein; KEGG: lhl:LBHH_1000 0.0014 Cell envelope-associated proteinase; K01361 lactocepin.
 
   
 0.911
D920_00318
Hypothetical protein; KEGG: efi:OG1RF_12454 3.1e-31 ubiD2; UbiD family decarboxylase; Psort location: Extracellular, score: 9.13.
 
     0.911
D920_02756
Hypothetical protein; KEGG: efi:OG1RF_12452 2.6e-27 ubiD; UbiD family decarboxylase.
 
     0.908
D920_02003
Legume lectins beta domain protein.
 
     0.842
D920_00974
Hypothetical protein; KEGG: efi:OG1RF_12452 6.4e-24 ubiD; UbiD family decarboxylase.
 
     0.836
D920_00850
Hypothetical protein; KEGG: efi:OG1RF_12452 4.3e-25 ubiD; UbiD family decarboxylase.
 
     0.828
D920_00381
Hypothetical protein; KEGG: efi:OG1RF_12452 1.2e-22 ubiD; UbiD family decarboxylase.
 
     0.817
D920_00838
Hypothetical protein; KEGG: efi:OG1RF_12454 7.2e-12 ubiD2; UbiD family decarboxylase.
 
     0.812
D920_02344
Hypothetical protein; KEGG: phu:Phum_PHUM547410 7.7e-05 papilin, putative; Psort location: Cellwall, score: 9.20.
 
     0.812
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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