Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_00311Hypothetical protein. (100 aa)    
Predicted Functional Partners:
D920_00312
Hypothetical protein; KEGG: ant:Arnit_0516 0.0048 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase K00549.
       0.980
D920_01520
KEGG: efc:EFAU004_02618 2.5e-242 serine/threonine-protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.923
smc
Segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.913
D920_02913
Carbohydrate binding domain protein; KEGG: lmy:LM5923_2862 3.0e-175 hypothetical protein; K01183 chitinase.
  
 
 0.913
D920_00129
Hypothetical protein.
  
  
 0.878
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
       0.838
D920_02361
Ankyrin repeat protein; KEGG: eci:UTI89_C0348 4.3e-25 yahD; transcription factor K06867.
  
  
 0.834
D920_02569
Hypothetical protein; KEGG: epr:EPYR_00540 5.6e-09 ospG; Ribosomal protein S6 kinase alpha-5.
  
  
 0.834
D920_02819
Tetratricopeptide repeat protein; KEGG: bya:BANAU_2226 1.2e-52 ypiA; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.830
D920_02367
Hypothetical protein; KEGG: ppu:PP_2945 0.0026 sensor histidine kinase/response regulator; K02482 two-component system, NtrC family, sensor kinase.
     
 0.807
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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