Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00373Metal cation transporter, ZIP family; KEGG: smm:Smp_146170 1.3e-34 DNA polymerase epsilon catalytic subunit; K02324 DNA polymerase epsilon subunit 1; Psort location: CytoplasmicMembrane, score: 10.00. (272 aa)    
Predicted Functional Partners:
D920_01288
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 4.5e-39 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.989
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.989
mntH
Metal ion transporter, metal ion transporter family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
  
 0.983
D920_02457
KEGG: efc:EFAU004_01014 1.2e-269 recJ; single-stranded-DNA-specific exonuclease RecJ K07462; Psort location: Cytoplasmic, score: 7.50.
  
    0.982
D920_01286
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.979
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.979
D920_01321
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.977
D920_01346
Iron dependent repressor, DNA binding domain protein; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.976
D920_01593
Copper-exporting ATPase; KEGG: efa:EF0298 0. copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.975
rpmE2
Ribosomal protein L31; KEGG: apb:SAR116_2278 1.5e-06 50S ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.973
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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