Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00397Hypothetical protein. (189 aa)    
Predicted Functional Partners:
D920_00398
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_00400
Putative bacteriocin transport accessory protein; KEGG: pfa:PF14_0694 5.6e-07 PDI-14; protein disulfide isomerase; K01829 protein disulfide-isomerase.
       0.975
D920_00395
Putative bacteriocin transport accessory protein; KEGG: pop:POPTR_1080427 3.7e-05 hypothetical protein; K00384 thioredoxin reductase (NADPH).
       0.971
D920_00399
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_3847 4.6e-53 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
       0.890
D920_00862
ABC transporter, ATP-binding protein; KEGG: cle:Clole_3263 7.9e-26 phosphonate-transporting ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.51.
       0.797
D920_01151
KEGG: efu:HMPREF0351_12646 2.1e-103 bcrA; bacitracin ABC superfamily ATP binding cassette transporter, ABC protein K09687; Psort location: CytoplasmicMembrane, score: 9.96.
       0.797
D920_00396
ABC transporter, ATP-binding protein; KEGG: mbv:MBOVPG45_0122 1.3e-35 peptidase C39 family/ABC transporter peptide-2 exporter (Pep2E) family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
D920_01097
ABC transporter, ATP-binding protein; KEGG: snv:SPNINV200_06240 1.0e-55 ccmA; heme exporter protein A (cytochrome C-type biogenesis protein) K09687; Psort location: CytoplasmicMembrane, score: 8.78.
       0.759
D920_00394
Hypothetical protein.
       0.757
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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