Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00412KEGG: suc:ECTR2_773 9.0e-41 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50. (429 aa)    
Predicted Functional Partners:
D920_00411
FeS assembly ATPase SufC; KEGG: thl:TEH_05630 4.1e-116 sufC; iron-sulfur cluster assembly ATPase SufC K09013; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
D920_00413
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.999
D920_00414
SUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 4.4e-09 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.999
D920_00415
KEGG: efl:EF62_2612 6.2e-239 sufB; FeS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
 
  
0.999
D920_02519
Hypothetical protein; KEGG: bqy:MUS_1155 1.8e-28 yitW; serine O-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.985
D920_01405
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
 
   
 0.978
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
     
 0.977
D920_01639
Ferritin-like protein; KEGG: efc:EFAU004_02816 3.9e-72 DNA protection during starvation protein 1 K04047; Psort location: Cytoplasmic, score: 9.97; Belongs to the Dps family.
  
  
 0.974
D920_00409
KEGG: pfe:PSF113_0026 8.7e-43 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.972
D920_02512
Hypothetical protein; KEGG: bqy:MUS_1155 9.5e-14 yitW; serine O-acetyltransferase.
 
   
 0.972
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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