Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00424Putative transmembrane permease MsmF; KEGG: apb:SAR116_1511 1.2e-38 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00. (299 aa)    
Predicted Functional Partners:
D920_00425
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 1.9e-54 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.998
D920_00426
ABC transporter, solute-binding protein; KEGG: ebe:B21_03866 1.2e-18 malE; malE, subunit of maltose ABC transporter K10108; Psort location: CytoplasmicMembrane, score: 9.68.
 
 0.997
D920_02630
KEGG: llk:LLKF_1844 3.9e-72 malG; maltose ABC transporter permease K10110; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.997
D920_03029
ABC transporter, ATP-binding protein; KEGG: efu:HMPREF0351_12250 1.9e-180 msmK; maltose ABC superfamily ATP binding cassette transporter, ABC protein K10112; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 0.997
D920_02974
ABC transporter, permease protein; KEGG: dth:DICTH_0382 1.4e-44 L-arabinose transport system permease AraQ; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.996
D920_00599
ABC transporter, permease protein; KEGG: tex:Teth514_2199 3.9e-56 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.994
D920_00597
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 3.0e-16 maltose/maltodextrin ABC transporter ATP-binding protein K10108; Psort location: CytoplasmicMembrane, score: 9.68.
 
 0.993
D920_01652
ABC transporter, permease protein; KEGG: tex:Teth514_2199 1.1e-37 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.990
D920_02578
ABC transporter, permease protein; KEGG: bcv:Bcav_3574 6.8e-43 monosaccharide-transporting ATPase K10190; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.990
D920_02628
ABC transporter, solute-binding protein; KEGG: snc:HMPREF0837_10106 1.1e-33 maltose/maltodextrin ABC transporter ATP-binding protein K10108.
  
 
 0.990
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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