Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_00547KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922. (246 aa)    
Predicted Functional Partners:
D920_00546
KEGG: ehr:EHR_01140 2.9e-74 phosphopantothenoylcysteine decarboxylase; Psort location: CytoplasmicMembrane, score: 9.55.
  
 0.999
D920_00545
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.997
D920_00548
Quinone oxidoreductase, YhdH/YhfP family; KEGG: efu:HMPREF0351_10695 7.4e-101 alcohol dehydrogenase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.997
D920_00538
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
   
 0.995
D920_00549
KEGG: apb:SAR116_1706 4.7e-12 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.994
potA
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
  
 0.994
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.993
D920_00551
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 5.3e-36 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
       0.990
fhs
KEGG: ehr:EHR_12175 2.0e-242 formate--tetrahydrofolate ligase; Psort location: Cytoplasmic, score: 7.50.
     
 0.984
D920_00552
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: gwc:GWCH70_0325 4.6e-92 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
       0.983
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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