potA protein (Enterococcus faecalis 13SDW01)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

potA

Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (361 aa)

Predicted Functional Partners:

D920_00551

0.999

D920_00552

0.999

D920_00553

0.999

D920_00549

0.997

murB

0.995

D920_00548

0.995

D920_00533

0.994

D920_00547

0.994

D920_02532

0.991

D920_02533

0.991

Your Current Organism:

Enterococcus faecalis 13SDW01

NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D920_00533	D920_00547	D920_00533	D920_00547	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	0.836
D920_00533	D920_00548	D920_00533	D920_00548	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	Quinone oxidoreductase, YhdH/YhfP family; KEGG: efu:HMPREF0351_10695 7.4e-101 alcohol dehydrogenase; Psort location: CytoplasmicMembrane, score: 8.78.	0.504
D920_00533	D920_00549	D920_00533	D920_00549	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	KEGG: apb:SAR116_1706 4.7e-12 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.	0.653
D920_00533	D920_00551	D920_00533	D920_00551	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 5.3e-36 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.	0.993
D920_00533	D920_00552	D920_00533	D920_00552	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: gwc:GWCH70_0325 4.6e-92 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.	0.994
D920_00533	D920_00553	D920_00533	D920_00553	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	KEGG: ebe:B21_01129 5.2e-61 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: CytoplasmicMembrane, score: 9.55.	0.981
D920_00533	D920_02532	D920_00533	D920_02532	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	Metallo-beta-lactamase domain protein; KEGG: zga:zobellia_1566 0.0040 metallohydrolase; Psort location: Cytoplasmic, score: 7.50.	0.776
D920_00533	D920_02533	D920_00533	D920_02533	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.0e-06 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.	0.776
D920_00533	murB	D920_00533	D920_00531	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	UDP-N-acetylmuramate dehydrogenase; Cell wall formation.	0.998
D920_00533	potA	D920_00533	D920_00550	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.	0.994
D920_00547	D920_00533	D920_00547	D920_00533	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	KEGG: twi:Thewi_2310 1.6e-36 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Psort location: Cytoplasmic, score: 7.50.	0.836
D920_00547	D920_00548	D920_00547	D920_00548	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	Quinone oxidoreductase, YhdH/YhfP family; KEGG: efu:HMPREF0351_10695 7.4e-101 alcohol dehydrogenase; Psort location: CytoplasmicMembrane, score: 8.78.	0.997
D920_00547	D920_00549	D920_00547	D920_00549	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	KEGG: apb:SAR116_1706 4.7e-12 DNA-binding protein; Psort location: Cytoplasmic, score: 7.50.	0.994
D920_00547	D920_00551	D920_00547	D920_00551	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 5.3e-36 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.	0.990
D920_00547	D920_00552	D920_00547	D920_00552	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: gwc:GWCH70_0325 4.6e-92 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.	0.983
D920_00547	D920_00553	D920_00547	D920_00553	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	KEGG: ebe:B21_01129 5.2e-61 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: CytoplasmicMembrane, score: 9.55.	0.982
D920_00547	D920_02532	D920_00547	D920_02532	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	Metallo-beta-lactamase domain protein; KEGG: zga:zobellia_1566 0.0040 metallohydrolase; Psort location: Cytoplasmic, score: 7.50.	0.830
D920_00547	D920_02533	D920_00547	D920_02533	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.0e-06 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.	0.830
D920_00547	murB	D920_00547	D920_00531	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	UDP-N-acetylmuramate dehydrogenase; Cell wall formation.	0.702
D920_00547	potA	D920_00547	D920_00550	KEGG: efu:HMPREF0351_10694 1.4e-65 coab; phosphopantothenate--cysteine ligase K01922.	Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.	0.994

page 1 of 6

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Co-occurrence

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About