Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_00571Hypothetical protein. (125 aa)    
Predicted Functional Partners:
D920_00576
Putative epimerase/dehydratase WbiI; KEGG: mpx:MPD5_1391 1.4e-179 UDP-N-acetylglucosamine 4,6-dehydratase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.950
tagU
Putative transcriptional regulator LytR; May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG).
       0.937
D920_00575
KEGG: efu:HMPREF0351_11967 3.8e-120 capC; capsular polysaccharide biosynthesis protein CapC; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.928
D920_01285
KEGG: efl:EF62_0786 1.2e-86 dapF; diaminopimelate epimerase K01778; Psort location: Cytoplasmic, score: 9.97.
       0.925
D920_00573
Chain length determinant protein; KEGG: bqy:MUS_3991 3.4e-41 ywqC; non-specific protein-tyrosine kinase.
       0.922
D920_01286
Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.911
D920_00574
Capsular exopolysaccharide family protein; KEGG: mpx:MPD5_1393 1.0e-62 tyrosine-protein kinase EpsD; Psort location: CytoplasmicMembrane, score: 8.78.
       0.900
D920_02229
Oligosaccharide biosynthesis protein Alg14 like protein; KEGG: acs:100561366 6.6e-13 UDP-N-acetylglucosamine transferase subunit ALG14 homolog; K07441 beta-1,4-N-acetylglucosaminyltransferase.
       0.884
D920_01289
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.864
D920_00579
Bacterial sugar transferase; KEGG: tep:TepRe1_1777 7.2e-71 UDP-phosphate galactose phosphotransferase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.860
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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