Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_00586Hypothetical protein; KEGG: sud:ST398NM01_0171 3.3e-12 Glycosyltransferase. (360 aa)    
Predicted Functional Partners:
D920_00582
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 4.4e-119 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.975
D920_00585
Nucleotide sugar dehydrogenase; KEGG: thl:TEH_04030 3.2e-164 ugd; UDP-glucose 6-dehydrogenase K00012; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.971
D920_00588
Polysaccharide biosynthesis protein; KEGG: vfi:VF_0348 2.0e-09 sensor protein UhpB K00936; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.970
D920_01881
KEGG: suq:HMPREF0772_10540 8.5e-45 gtfB; accessory Sec system glycosyltransferase GtfB.
   
 
 0.967
D920_00589
Nucleotide sugar dehydrogenase; KEGG: bth:BT_0602 1.3e-137 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; K00100; Psort location: Cytoplasmic, score: 9.97; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.962
D920_00590
KEGG: lsl:LSL_1276 5.8e-133 wecB; UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.956
D920_01885
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
 
 
 0.952
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.944
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.942
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
 
 
 0.938
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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