Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00594KEGG: bmq:BMQ_1760 1.7e-16 Transglycosylase associated protein; Psort location: CytoplasmicMembrane, score: 10.00. (81 aa)    
Predicted Functional Partners:
D920_00593
Hypothetical protein; KEGG: ncr:NCU01912 0.0012 similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.991
D920_00592
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.983
D920_01091
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.983
D920_03003
CsbD-like protein; KEGG: mel:Metbo_0700 0.00027 cob/CoM heterodisulfide reductase subunit C K03390; Belongs to the UPF0337 (CsbD) family.
  
  
 0.970
D920_00591
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.954
D920_01092
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
   
 0.953
D920_02473
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 7.9e-09 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.921
D920_02118
KEGG: lra:LRHK_15 2.1e-57 yfkM; general stress protein 18; K05520 protease I; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.914
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.905
D920_01331
Aminopeptidase PepS; KEGG: efu:HMPREF0351_10886 4.0e-189 M29 family aminopeptidase; Psort location: Cytoplasmic, score: 7.50.
       0.902
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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