Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00606Thioredoxin; KEGG: efc:EFAU004_02107 2.2e-46 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family. (109 aa)    
Predicted Functional Partners:
D920_00718
KEGG: efc:EFAU004_02003 5.3e-146 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
 
 0.998
D920_00603
Hypothetical protein; KEGG: stz:SPYALAB49_001553 1.5e-08 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.995
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
     
 0.995
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
   
 
 0.995
D920_00604
CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.994
rnhC
Ribonuclease HIII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.987
D920_02981
Pyridine nucleotide-disulfide oxidoreductase; KEGG: efc:EFAU004_02225 2.7e-144 ferredoxin--NADP reductase K00384; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.980
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
   
 
 0.977
D920_02731
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.970
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
 
 
 0.968
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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