Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_00631Putative transcriptional regulator; KEGG: vfi:VF_A0400 4.0e-09 lsrR; transcriptional repressor; Psort location: Cytoplasmic, score: 7.50. (363 aa)    
Predicted Functional Partners:
D920_00632
KEGG: efc:EFAU004_02076 7.1e-167 glyceraldehyde-3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.999
pgk
Phosphoglycerate kinase; KEGG: ehr:EHR_08395 9.0e-199 pgk; phosphoglycerate kinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.998
D920_00630
KEGG: ehr:EHR_08380 1.2e-171 RNA polymerase factor sigma-54; Psort location: CytoplasmicMembrane, score: 8.16.
 
   
 0.997
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.997
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.997
D920_02465
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: efu:HMPREF0351_11300 2.3e-168 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.987
D920_01522
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.986
D920_01963
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
     
 0.972
D920_00643
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.968
D920_02239
KEGG: ccb:Clocel_2598 2.9e-154 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.961
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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