Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
D920_00641KEGG: efc:EFAU004_02068 7.5e-37 GNAT family acetyltransferase K06975; Psort location: Cytoplasmic, score: 7.50. (91 aa)    
Predicted Functional Partners:
D920_00640
Hypothetical protein.
 
  
 0.999
D920_00643
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.996
rpiA
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.990
D920_01448
Bacterial transferase hexapeptide repeat protein; KEGG: efc:EFAU004_02193 4.2e-66 Carbonic anhydrase/acetyltransferase.
       0.976
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
  
    0.971
D920_01565
PIN domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.969
D920_01567
dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
       0.967
D920_00639
Hypothetical protein; KEGG: efu:HMPREF0351_12059 7.0e-121 alpha/beta superfamily hydrolase.
       0.966
ppaC
Inorganic diphosphatase PpaC; KEGG: efc:EFAU004_01167 6.2e-129 ppaC; manganese-dependent inorganic pyrophosphatase K15986; Psort location: Cytoplasmic, score: 9.97.
  
    0.965
D920_01475
Aminopeptidase; KEGG: efc:EFAU004_02214 2.6e-201 Aminopeptidase C K01372; Psort location: Cytoplasmic, score: 9.67; Belongs to the peptidase C1 family.
       0.957
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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