Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00670Hypothetical protein; Belongs to the HesB/IscA family. (116 aa)    
Predicted Functional Partners:
D920_00669
Putative general stress protein A; KEGG: efc:EFAU004_01481 2.1e-112 glycosyl transferase family protein; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
       0.963
D920_01095
CorA-like protein; Psort location: Cytoplasmic, score: 7.50.
       0.961
D920_00593
Hypothetical protein; KEGG: ncr:NCU01912 0.0012 similar to protein O-D-mannosyltransferase; K00728 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.925
D920_01094
KEGG: efc:EFAU004_01478 6.2e-136 short chain dehydrogenase/reductase family oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
       0.893
D920_01436
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bmd:BMD_1866 1.2e-102 oxidoreductase K00540; Psort location: Cytoplasmic, score: 9.97.
       0.893
D920_00668
Putative general stress protein A; KEGG: efu:HMPREF0351_11490 4.2e-107 family 8 glycosyltransferase; Psort location: Cytoplasmic, score: 7.50; overlaps another CDS with the same product name.
       0.892
D920_02686
Isochorismatase family protein; KEGG: efu:HMPREF0351_11492 5.8e-46 isochorismatase; Psort location: Cytoplasmic, score: 7.50.
       0.742
D920_01091
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.732
D920_00667
Cof-like hydrolase; KEGG: efc:EFAU004_01483 5.1e-70 HAD superfamily hydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.693
D920_00591
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.682
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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