Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00708ABC transporter, ATP-binding protein; KEGG: efc:EFAU004_02011 3.1e-260 Multidrug resistance-like ATP-binding protein mdlA K06147; Psort location: CytoplasmicMembrane, score: 10.00. (583 aa)    
Predicted Functional Partners:
D920_00709
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_11442 7.7e-257 mdlB; multidrug ABC superfamily ATP binding cassette transporter, ABC protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.998
D920_00718
KEGG: efc:EFAU004_02003 5.3e-146 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
     
 0.990
nfo
Apurinic endonuclease; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
  
  
 0.987
D920_00707
Hypothetical protein; KEGG: lki:LKI_01225 2.0e-20 LexA repressor K09976; Psort location: CytoplasmicMembrane, score: 9.55.
       0.951
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.941
D920_01154
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_11766 5.3e-194 multidrug ABC superfamily ATP binding cassette transporter, ABC protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.938
D920_01450
ABC transporter, ATP-binding protein; KEGG: cle:Clole_4005 3.1e-182 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.936
D920_02214
ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_2057 3.3e-194 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.936
D920_03025
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_0117 3.0e-152 yfiB1; lipid A export ATP-binding/permease protein msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.935
D920_02138
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_10073 1.8e-170 ndvA; ABC transporter membrane protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.934
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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