Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00759Hypothetical protein; KEGG: efc:EFAU004_01788 1.1e-152 SAM-dependent methyltransferase K06969. (390 aa)    
Predicted Functional Partners:
aroD
3-dehydroquinate dehydratase, type I; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.
       0.997
D920_00761
YbaK/EbsC protein; KEGG: bya:BANAU_2580 6.0e-28 yjdI; prolyl-tRNA synthetase K03976; Psort location: Cytoplasmic, score: 7.50; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
 
     0.996
D920_00756
Hypothetical protein; KEGG: bck:BCO26_2019 0.00011 ABC transporter-like protein; K02017 molybdate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 7.50.
       0.989
D920_02170
Hypothetical protein; KEGG: pcb:PC000690.00.0 0.0076 hypothetical protein; K10696 E3 ubiquitin-protein ligase BRE1; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0342 family.
     
 0.984
D920_00757
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.983
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.983
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 1.5e-16 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
 
   
 0.977
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
     
 0.973
D920_02349
Hypothetical protein; KEGG: ddh:Desde_1787 0.0049 nitric oxide reductase large subunit; K04561 nitric oxide reductase subunit B; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.973
D920_02081
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.51.
       0.967
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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