Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00799ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: efu:HMPREF0351_11008 2.1e-229 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78. (501 aa)    
Predicted Functional Partners:
D920_00798
Response regulator ArlR; KEGG: rha:RHA1_ro05622 1.5e-47 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.999
D920_00797
Phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.994
D920_00750
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: pmg:P9301_12431 3.1e-38 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.987
D920_02300
Transcriptional regulatory protein WalR; KEGG: bbp:BBPR_1604 5.7e-55 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.983
D920_02734
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: bbp:BBPR_1604 7.5e-53 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.983
D920_01149
Response regulator receiver domain protein; KEGG: pme:NATL1_11471 2.4e-33 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.980
D920_02068
KEGG: rha:RHA1_ro04741 4.3e-34 phoP; response regulator, two-component system K02483; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.978
D920_01771
Putative heme response regulator HssR; KEGG: bbp:BBPR_1604 1.4e-35 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.974
D920_00334
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 5.0e-40 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.971
D920_03092
Putative response regulator protein GraR; KEGG: bbp:BBPR_1604 2.2e-30 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.964
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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