Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_00824KEGG: efc:EFAU004_00277 2.1e-183 glutamyl aminopeptidase K01261. (359 aa)    
Predicted Functional Partners:
D920_00821
tRNA binding domain protein; KEGG: efu:HMPREF0351_10247 8.0e-88 pheT; phenylalanine--tRNA ligase beta subunit K06878; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.995
D920_00823
Thioredoxin; KEGG: lru:HMPREF0538_20267 6.6e-29 trxA; thioredoxin; Psort location: Cytoplasmic, score: 7.50.
       0.995
D920_00825
Hypothetical protein; KEGG: bmq:BMQ_4832 6.9e-11 peptidase; Psort location: CytoplasmicMembrane, score: 8.16.
       0.995
D920_00822
KEGG: apb:SAR116_0757 4.6e-05 universal stress protein family protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.994
D920_02776
Hypothetical protein; KEGG: efu:HMPREF0351_11070 2.1e-55 S-adenosyl-L-methionine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.991
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
  
 0.966
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
       0.953
D920_01511
KEGG: efc:EFAU004_02612 2.0e-258 oligoendopeptidase, PepF/M3 family; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.949
D920_01377
Putative Xaa-Pro dipeptidase; KEGG: efu:HMPREF0351_10775 6.8e-162 pepQ; M24B family Xaa-Pro dipeptidase K01262; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.944
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
  
 0.940
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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