Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00838Hypothetical protein; KEGG: efi:OG1RF_12454 7.2e-12 ubiD2; UbiD family decarboxylase. (235 aa)    
Predicted Functional Partners:
D920_00837
Hypothetical protein; KEGG: mbu:Mbur_0710 0.0036 acetolactate synthase 3 catalytic subunit K01652.
 
  
 0.986
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
  
  
 0.961
D920_02320
Bacterial group 3 Ig-like protein; KEGG: btl:BALH_2309 4.1e-08 bacillolysin K01400.
 
 
 0.960
D920_00238
Hypothetical protein; KEGG: sud:ST398NM01_1060 4.6e-08 Chitinase.
 
 
 0.958
D920_00071
Hypothetical protein.
 
  
 0.952
D920_02532
Metallo-beta-lactamase domain protein; KEGG: zga:zobellia_1566 0.0040 metallohydrolase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.948
D920_02533
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.0e-06 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.948
D920_02001
Hypothetical protein.
 
  
 0.915
D920_02819
Tetratricopeptide repeat protein; KEGG: bya:BANAU_2226 1.2e-52 ypiA; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.915
D920_00973
Hypothetical protein.
 
  
 0.913
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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