Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00843Putative protease synthase and sporulation negative regulatory protein PAI 1; KEGG: btl:BALH_2906 9.0e-41 paiA; spermine/spermidine N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (187 aa)    
Predicted Functional Partners:
D920_00844
KEGG: pfe:PSF113_1990 0.00021 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
   
 0.999
D920_00842
B3/4 domain protein; KEGG: sng:SNE_A16900 7.8e-31 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 7.50.
       0.997
D920_02109
Amidase; KEGG: thl:TEH_12530 5.0e-150 putative amidase; Psort location: Cytoplasmic, score: 9.97; Belongs to the amidase family.
  
    0.986
D920_02107
Putative arginine ABC transporter, permease protein ArtQ; KEGG: rcm:A1E_00665 2.5e-29 sdhA; succinate dehydrogenase flavoprotein subunit K02029; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.976
D920_02108
KEGG: hpa:HPAG1_0923 2.8e-30 amino acid ABC transporter, periplasmic binding protein K02030; Belongs to the bacterial solute-binding protein 3 family.
  
  
 0.976
pheT
KEGG: efu:HMPREF0351_11283 0. pheT3; phenylalanine--tRNA ligase beta subunit K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.967
pheS
KEGG: efc:EFAU004_01039 4.6e-172 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889; Psort location: Cytoplasmic, score: 10.00.
       0.967
ftsH
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
  
 0.966
D920_00548
Quinone oxidoreductase, YhdH/YhfP family; KEGG: efu:HMPREF0351_10695 7.4e-101 alcohol dehydrogenase; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.960
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.959
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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