Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00844KEGG: pfe:PSF113_1990 0.00021 MarR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50. (160 aa)    
Predicted Functional Partners:
D920_00843
Putative protease synthase and sporulation negative regulatory protein PAI 1; KEGG: btl:BALH_2906 9.0e-41 paiA; spermine/spermidine N-acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 0.999
D920_00842
B3/4 domain protein; KEGG: sng:SNE_A16900 7.8e-31 lysS; lysyl-tRNA synthetase K04567; Psort location: Cytoplasmic, score: 7.50.
       0.997
D920_02613
KEGG: efi:OG1RF_10412 2.1e-158 ABC superfamily ATP binding cassette transporter, membrane protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.973
D920_01326
YihY family protein; KEGG: efu:HMPREF0351_10890 3.1e-118 rbn; ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family.
     
 0.957
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
  
 0.938
D920_02077
KEGG: efi:OG1RF_12271 7.5e-211 cdr; coA-disulfide reductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.937
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.933
D920_01522
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
     
 0.915
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.905
D920_02467
Hydrolase, NUDIX family; KEGG: bao:BAMF_0506 1.2e-45 yjhB; ADP-ribose pyrophosphatase.
  
  
 0.905
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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