Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00871Pentapeptide repeat family protein; KEGG: dsa:Desal_0704 0.0038 adenylate cyclase K05851. (230 aa)    
Predicted Functional Partners:
D920_00344
Hypothetical protein; KEGG: efi:OG1RF_12529 5.5e-73 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.991
D920_02203
Signal peptidase I; KEGG: efu:HMPREF0351_12299 1.8e-83 sipA; Sec family Type I general secretory pathway S26 family signal peptidase K03100; Psort location: Cellwall, score: 8.76.
     
 0.985
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
    0.983
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
    0.971
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.966
D920_03118
Transcriptional regulator, PadR family; KEGG: ase:ACPL_2208 3.2e-06 Coproporphyrinogen 3 oxidase, aerobic.
     
 0.965
D920_00877
KEGG: efc:EFAU004_00259 6.4e-134 diphosphomevalonate decarboxylase K01597.
 
     0.949
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.943
D920_00876
Mevalonate kinase; KEGG: efu:HMPREF0351_10225 7.4e-117 mvk; mevalonate kinase K00869; Psort location: Cytoplasmic, score: 7.50.
       0.942
D920_03143
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
     
 0.940
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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