Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
D920_00878Phosphomevalonate kinase; KEGG: efc:EFAU004_00258 7.6e-163 phosphomevalonate kinase K00938; Psort location: Cytoplasmic, score: 7.50. (361 aa)    
Predicted Functional Partners:
D920_00876
Mevalonate kinase; KEGG: efu:HMPREF0351_10225 7.4e-117 mvk; mevalonate kinase K00869; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.999
D920_00877
KEGG: efc:EFAU004_00259 6.4e-134 diphosphomevalonate decarboxylase K01597.
  
 0.999
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.999
D920_02778
KEGG: efu:HMPREF0351_11071 6.6e-164 hydroxymethylglutaryl-CoA synthase K01641; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.996
D920_02779
hydroxymethylglutaryl-CoA reductase, degradative; KEGG: efu:HMPREF0351_11072 0. acetyl-CoA acetyltransferase K00054; Psort location: Cytoplasmic, score: 9.95.
 
 
 0.996
pheT
KEGG: efu:HMPREF0351_11283 0. pheT3; phenylalanine--tRNA ligase beta subunit K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
 0.992
D920_00874
Deoxyguanosine kinase; KEGG: efu:HMPREF0351_10226 2.1e-87 deoxynucleoside kinase; Psort location: Cytoplasmic, score: 7.50.
     
 0.983
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.983
D920_02708
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.972
dinG
DnaQ family exonuclease/DinG family helicase; 3'-5' exonuclease.
       0.967
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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