Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_00912Glycine betaine/carnitine/choline-binding protein; KEGG: efi:OG1RF_10593 1.6e-123 opuCC; glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, binding protein K05845; Psort location: CytoplasmicMembrane, score: 9.68. (305 aa)    
Predicted Functional Partners:
D920_00910
Choline ABC transporter, ATP-binding protein OpuBA; KEGG: efu:HMPREF0351_10198 3.6e-179 opuAA; glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, ABC protein K05847; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.999
D920_00911
Choline transport system permease protein opuBB; KEGG: efi:OG1RF_10594 8.4e-93 opuCB; glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.999
D920_00913
KEGG: efi:OG1RF_10592 1.1e-97 opuCD; glycine/betaine/carnitine/choline ABC superfamily ATP binding cassette transporter, membrane protein K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.999
D920_02612
KEGG: efu:HMPREF0351_11163 2.2e-108 ABC superfamily ATP binding cassette transporter, ABC protein K05847; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.999
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.995
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.992
D920_02613
KEGG: efi:OG1RF_10412 2.1e-158 ABC superfamily ATP binding cassette transporter, membrane protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
0.985
D920_00543
NAD(P)H quinone oxidoreductase, PIG3 family; KEGG: efu:HMPREF0351_10690 4.1e-123 alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.971
D920_02308
KEGG: efc:EFAU004_02434 4.5e-181 glycine betaine transporter ATP-binding subunit K02000; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.964
D920_02136
Putative esterase; KEGG: efu:HMPREF0351_12538 1.5e-116 estA; esterase; K03930 putative tributyrin esterase; Psort location: Extracellular, score: 9.60.
       0.958
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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