Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_00918Phage infection protein; KEGG: edi:EDI_048910 2.3e-14 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 10.00. (917 aa)    
Predicted Functional Partners:
D920_02423
Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 3.8e-33 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.995
D920_00916
Cation diffusion facilitator family transporter; KEGG: ppo:PPM_1832 5.1e-157 ydaO1; putative O-acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.993
D920_02367
Hypothetical protein; KEGG: ppu:PP_2945 0.0026 sensor histidine kinase/response regulator; K02482 two-component system, NtrC family, sensor kinase.
     
 0.992
D920_00919
GroES-like protein; KEGG: efu:HMPREF0351_10186 1.8e-106 qor; NADPH:quinone reductase; Psort location: Cytoplasmic, score: 9.97.
     
 0.991
D920_00968
Putative dihydroxyacetone kinase regulator; KEGG: bha:BH3415 0.00070 NADH dehydrogenase; K03885 NADH dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.987
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
     
 0.978
D920_02508
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.966
D920_02884
KEGG: apb:SAR116_0013 9.3e-07 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
     
 0.964
D920_00502
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 3.1e-06 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.942
D920_01130
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 7.9e-07 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.942
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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