Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_01002Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: efc:EFAU004_00167 6.6e-93 aldose dehydrogenase K00059; Psort location: Cytoplasmic, score: 9.67. (253 aa)    
Predicted Functional Partners:
D920_01003
Hypothetical protein; KEGG: efu:HMPREF0351_10125 4.5e-30 metG; methionine--tRNA ligase.
 
     0.999
D920_00671
YigZ family protein; KEGG: scp:HMPREF0833_10002 2.6e-50 xaa-Pro dipeptidase; Psort location: Cytoplasmic, score: 7.50.
     
 0.991
D920_00672
Hypothetical protein.
     
 0.988
D920_01005
M protein trans-acting positive regulator; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.986
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.984
D920_00703
Transglycosylase; KEGG: efc:EFAU004_02016 0. glycosyl transferase family protein K03693; Psort location: CytoplasmicMembrane, score: 9.51.
     
 0.979
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.977
D920_01260
KEGG: efu:HMPREF0351_10971 2.7e-119 fabD2; [acyl-carrier-protein] S-malonyltransferase K00645; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.976
D920_00901
KEGG: efu:HMPREF0351_10204 0. aad; aldehyde-alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.973
D920_01258
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.970
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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