Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01095CorA-like protein; Psort location: Cytoplasmic, score: 7.50. (315 aa)    
Predicted Functional Partners:
D920_01094
KEGG: efc:EFAU004_01478 6.2e-136 short chain dehydrogenase/reductase family oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.968
D920_00670
Hypothetical protein; Belongs to the HesB/IscA family.
       0.961
D920_02686
Isochorismatase family protein; KEGG: efu:HMPREF0351_11492 5.8e-46 isochorismatase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.961
D920_01093
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.945
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.944
D920_00959
ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c14260 1.1e-56 glnH; amino acid ABC transporter amino acid-binding/permease K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.931
D920_02423
Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 3.8e-33 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
  
 0.931
D920_01956
ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c14260 2.5e-139 glnH; amino acid ABC transporter amino acid-binding/permease K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.922
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
       0.920
D920_01593
Copper-exporting ATPase; KEGG: efa:EF0298 0. copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.920
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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