Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01097ABC transporter, ATP-binding protein; KEGG: snv:SPNINV200_06240 1.0e-55 ccmA; heme exporter protein A (cytochrome C-type biogenesis protein) K09687; Psort location: CytoplasmicMembrane, score: 8.78. (216 aa)    
Predicted Functional Partners:
D920_01100
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.965
D920_00271
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.949
D920_02243
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.941
D920_00863
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.902
D920_02916
KEGG: snc:HMPREF0837_12256 5.9e-21 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.899
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.883
D920_01520
KEGG: efc:EFAU004_02618 2.5e-242 serine/threonine-protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.880
D920_00334
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 5.0e-40 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.877
D920_01433
Putative transcriptional regulatory protein WalR; KEGG: fal:FRAAL1628 2.7e-39 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.877
D920_00396
ABC transporter, ATP-binding protein; KEGG: mbv:MBOVPG45_0122 1.3e-35 peptidase C39 family/ABC transporter peptide-2 exporter (Pep2E) family; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.875
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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