Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
Databases
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[Homology]
Score
D920_01124Hypothetical protein; KEGG: edi:EDI_341030 0.00049 intracellular protein transport protein USO1. (341 aa)    
Predicted Functional Partners:
D920_01122
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
    0.995
D920_01127
DNA-binding helix-turn-helix protein; KEGG: fnu:FN0522 0.00098 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.994
D920_01935
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.991
D920_01947
Conjugal transfer family protein; Psort location: CytoplasmicMembrane, score: 8.16.
 
  
 0.987
D920_00503
Replication initiation factor; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.984
D920_00510
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.979
D920_01123
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.978
D920_01121
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.976
D920_01948
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.901
D920_01130
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 7.9e-07 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.896
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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