Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_01135Hypothetical protein; KEGG: efu:HMPREF0351_12621 6.2e-33 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. (351 aa)    
Predicted Functional Partners:
D920_02819
Tetratricopeptide repeat protein; KEGG: bya:BANAU_2226 1.2e-52 ypiA; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 7.50.
       0.962
D920_01734
KEGG: pfa:PFL1925w 0.0037 cell division protein FtsH, putative K01417; Psort location: Cytoplasmic, score: 7.50.
       0.904
D920_01729
Terminase small subunit; Psort location: Cytoplasmic, score: 7.50.
       0.898
D920_00084
Phage uncharacterized protein; Psort location: Cytoplasmic, score: 7.50.
       0.889
D920_02296
Metallo-beta-lactamase domain protein; KEGG: efi:OG1RF_10969 7.1e-112 beta-lactamase; Psort location: Cytoplasmic, score: 7.50.
       0.889
D920_02871
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
       0.879
D920_01520
KEGG: efc:EFAU004_02618 2.5e-242 serine/threonine-protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.872
D920_01399
Metallo-beta-lactamase domain protein; KEGG: efu:HMPREF0351_10757 3.0e-104 metal-dependent hydrolase; Psort location: Cytoplasmic, score: 7.50.
       0.838
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.838
D920_01522
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
       0.836
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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