Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
D920_01176KEGG: fal:FRAAL2549 1.9e-56 antibiotic resistance ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 9.99. (310 aa)    
Predicted Functional Partners:
D920_01184
Putative ABC transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.994
D920_01177
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
  
 0.990
D920_01178
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.989
D920_00324
ABC-2 type transporter; KEGG: phu:Phum_PHUM433370 3.1e-07 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.973
D920_02243
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.966
D920_02030
ABC-2 type transporter; KEGG: apb:SAR116_0895 5.8e-46 ABC protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.965
D920_01181
Transcriptional regulator, PadR family; KEGG: ase:ACPL_2208 0.0099 Coproporphyrinogen 3 oxidase, aerobic; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.960
D920_02365
KEGG: aai:AARI_02020 3.1e-31 ABC transporter ATPase and permease components K01990; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.954
D920_02099
ABC-2 type transporter; KEGG: bra:BRADO7121 8.2e-05 ABC transporter permease ATP-binding protein K13926; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.950
D920_00271
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.949
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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