Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01204Hypothetical protein. (85 aa)    
Predicted Functional Partners:
D920_00405
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: apv:Apar_1344 4.7e-37 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
       0.938
D920_00407
Glycine cleavage H-protein; KEGG: mpx:MPD5_0506 7.5e-21 arsenate reductase; Psort location: Cytoplasmic, score: 7.50.
       0.871
D920_00622
Potassium uptake protein, TrkH family; KEGG: efc:EFAU004_02092 1.8e-177 ntpJ; V-type sodium ATP synthase subunit J K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.772
D920_02206
Cation transport protein; KEGG: efi:OG1RF_11939 1.7e-179 ntpJ2; Trk family potassium (K+) transporter, membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.772
D920_00997
Formate/nitrite transporter; KEGG: spy:SPy_1424 3.0e-17 formate dehydrogenase; Psort location: CytoplasmicMembrane, score: 10.00.
      
 0.759
D920_00406
Transcriptional regulator, Spx/MgsR family; KEGG: efu:HMPREF0351_10569 1.0e-39 arsC; arsenate reductase; Belongs to the ArsC family.
       0.733
D920_00518
Glyoxalase family protein; KEGG: efu:HMPREF0351_10669 1.6e-50 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 7.50.
      
 0.692
D920_01119
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 3.8e-33 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Belongs to the 'phage' integrase family.
       0.668
D920_00735
Formate/nitrite transporter; KEGG: spy:SPy_1424 1.2e-82 formate dehydrogenase; Psort location: CytoplasmicMembrane, score: 10.00.
      
 0.657
D920_02124
Branched-chain amino acid transport protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.639
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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