Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01278KEGG: efc:EFAU004_01339 6.5e-54 GNAT family acetyltransferase; Psort location: Cytoplasmic, score: 7.50. (148 aa)    
Predicted Functional Partners:
D920_01277
Hypothetical protein; KEGG: pfe:PSF113_1419 8.2e-31 yfgO; protein YfgO K03548; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.997
D920_01276
Hypothetical protein; KEGG: hpa:HPAG1_1423 7.7e-51 hemolysin domain-containing protein K00088; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.993
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
       0.989
D920_02870
KEGG: efc:EFAU004_01169 0. formate acetyltransferase K00656; Psort location: Cytoplasmic, score: 9.97.
       0.967
arcA
Arginine deiminase; KEGG: efc:EFAU004_01736 7.9e-200 arcA; arginine deiminase K01478; Psort location: Cytoplasmic, score: 7.50.
       0.960
D920_02997
Metallo-beta-lactamase domain protein; KEGG: bqy:MUS_3211 3.9e-63 ytkL; metal dependent hydrolase; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0173 family.
       0.959
D920_02660
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.957
D920_02982
KEGG: efu:HMPREF0351_12209 2.7e-71 pgpA; phosphatidylglycerophosphatase; Psort location: Cytoplasmic, score: 7.50.
       0.955
D920_02497
Hypothetical protein.
       0.948
D920_00062
Hypothetical protein; KEGG: dda:Dd703_0763 1.9e-10 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.943
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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