Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01303KEGG: efa:EF2168 6.7e-84 licD1 protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50. (279 aa)    
Predicted Functional Partners:
D920_01306
NAD dependent epimerase/dehydratase family protein; KEGG: mps:MPTP_0821 4.0e-109 dTDP-glucose 4,6-dehydratase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.998
D920_01307
KEGG: mpx:MPD5_1118 1.1e-99 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991.
 
   
 0.998
D920_01301
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.996
D920_01308
LICD family protein; KEGG: snc:HMPREF0837_11182 3.3e-75 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
 
   
0.996
D920_01305
Glycosyltransferase, group 2 family protein; KEGG: sor:SOR_0761 9.4e-78 putative glycosyl transferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
   
 0.991
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.987
D920_01300
KEGG: efc:EFAU004_01365 8.6e-123 NAD-dependent epimerase/dehydratase K01784; Psort location: Cytoplasmic, score: 9.97.
     
 0.975
D920_01304
O-antigen polymerase; KEGG: efc:EFAU004_01377 6.0e-22 O-Antigen polymerase; Psort location: CytoplasmicMembrane, score: 10.00.
     0.975
D920_01310
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: efc:EFAU004_01383 2.0e-210 undecaprenyl-phosphate galactosephosphotransferase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.975
D920_01309
KEGG: aur:HMPREF9243_1662 6.4e-63 amsE; amylovoran biosynthesis glycosyltransferase AmsE; Psort location: Cytoplasmic, score: 7.50.
     
 0.969
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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