Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01328Flavodoxin; KEGG: sgg:SGGBAA2069_c15070 6.0e-51 flaV; Flavodoxin/nitric oxide synthase; Psort location: Cytoplasmic, score: 7.50. (147 aa)    
Predicted Functional Partners:
D920_01967
Pyruvate synthase; KEGG: efu:HMPREF0351_11628 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 7.50.
     
 0.999
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
  
 0.995
D920_01326
YihY family protein; KEGG: efu:HMPREF0351_10890 3.1e-118 rbn; ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UPF0761 family.
     
 0.994
D920_01325
Glycosyltransferase, group 4 family; KEGG: efu:HMPREF0351_10891 8.0e-175 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase K13685; Psort location: CytoplasmicMembrane, score: 10.00.
       0.992
D920_00956
Chorismate mutase; KEGG: efc:EFAU004_00196 1.2e-100 maltose O-acetyltransferase K00661; Psort location: Cytoplasmic, score: 9.67.
     
 0.984
D920_01331
Aminopeptidase PepS; KEGG: efu:HMPREF0351_10886 4.0e-189 M29 family aminopeptidase; Psort location: Cytoplasmic, score: 7.50.
       0.983
rpmE2
Ribosomal protein L31; KEGG: apb:SAR116_2278 1.5e-06 50S ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.67.
  
   0.980
rplS
Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
   
   0.976
D920_02995
DHHA1 domain protein; KEGG: efu:HMPREF0351_12223 1.8e-131 phosphoesterase K06881; Psort location: Cytoplasmic, score: 7.50.
 
     0.973
D920_01579
Nitroreductase family protein; KEGG: efu:HMPREF0351_12619 1.3e-89 NADH dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.971
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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