Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01334Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (137 aa)    
Predicted Functional Partners:
D920_01336
Hypothetical protein.
 
     0.999
D920_01335
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.997
D920_01333
Hypothetical protein; KEGG: efu:HMPREF0351_10817 1.3e-126 GNAT family acetyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
     0.994
D920_01338
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.980
D920_01170
Putative PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.956
D920_01342
DEAD/DEAH box helicase; KEGG: thl:TEH_16770 6.6e-109 putative RNA helicase; Psort location: Cytoplasmic, score: 9.97.
       0.939
D920_01339
Lichenan-specific phosphotransferase enzyme IIA component; KEGG: efc:EFAU004_00327 2.0e-43 PTS system, lactose/cellobiose-specific IIA component K02759; Psort location: Cytoplasmic, score: 9.97.
       0.917
D920_00807
Lichenan-specific phosphotransferase enzyme IIA component; KEGG: efu:HMPREF0351_10332 1.1e-44 PTS family lactose/cellobiose (lac) porter component IIA K02759; Psort location: Cytoplasmic, score: 9.97.
       0.896
D920_01597
Putative PTS system, lactose-specific IIC component; KEGG: eat:EAT1b_1051 3.7e-202 PTS system lactose/cellobiose family transporter subunit IIC; K02787 PTS system, lactose-specific IIB component K02788; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.817
D920_01598
KEGG: lba:Lebu_0588 1.7e-30 PTS system, lactose-specific IIa component; K02786 PTS system, lactose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
       0.805
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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