Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_01346Iron dependent repressor, DNA binding domain protein; Psort location: Cytoplasmic, score: 9.97. (215 aa)    
Predicted Functional Partners:
D920_03112
Metal ion ABC transporter, permease protein; KEGG: pfe:PSF113_0030 1.3e-30 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.998
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.997
D920_03111
Manganese ABC transporter substrate-binding lipoprotein; KEGG: sah:SaurJH1_2478 2.9e-19 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.996
D920_03113
Putative manganese transport system ATP-binding protein MntA; KEGG: efu:HMPREF0351_10498 1.2e-79 ABC superfamily ATP binding cassette transporter, ABC protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
  
 0.996
D920_01331
Aminopeptidase PepS; KEGG: efu:HMPREF0351_10886 4.0e-189 M29 family aminopeptidase; Psort location: Cytoplasmic, score: 7.50.
       0.991
mntH
Metal ion transporter, metal ion transporter family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.988
D920_01538
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 9.4e-30 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.977
D920_02311
FeoA domain protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.977
D920_00373
Metal cation transporter, ZIP family; KEGG: smm:Smp_146170 1.3e-34 DNA polymerase epsilon catalytic subunit; K02324 DNA polymerase epsilon subunit 1; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.976
D920_02310
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.976
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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