Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
D920_01405Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (200 aa)    
Predicted Functional Partners:
D920_01404
KEGG: efu:HMPREF0351_10747 0. nrdD; incomplete anaerobic ribonucleotide reductase large subunit K00527; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.999
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.997
D920_02314
Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
     
 0.993
D920_03143
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
  
 0.988
D920_00486
Putative nrdI protein; KEGG: efu:HMPREF0351_10659 3.3e-59 nrdI; ribonucleotide reductase K03647; Belongs to the NrdI family.
     
 0.985
folE
GTP cyclohydrolase I; KEGG: efa:EF3267 1.2e-54 folE; GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.981
D920_00412
KEGG: suc:ECTR2_773 9.0e-41 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.978
D920_00050
KEGG: smn:SMA_0861 5.6e-151 glf; UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase; Psort location: Cytoplasmic, score: 7.50.
     
 0.977
D920_00411
FeS assembly ATPase SufC; KEGG: thl:TEH_05630 4.1e-116 sufC; iron-sulfur cluster assembly ATPase SufC K09013; Psort location: Cytoplasmic, score: 9.97.
     
 0.976
D920_00414
SUF system FeS assembly protein, NifU family; KEGG: pfe:PSF113_1013 4.4e-09 iscU; protein IscU K04488; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.976
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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