Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
D920_01450ABC transporter, ATP-binding protein; KEGG: cle:Clole_4005 3.1e-182 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (576 aa)    
Predicted Functional Partners:
D920_01449
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_12220 1.4e-255 mdlB2; multidrug ABC superfamily ATP binding cassette transporter, ABC protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.999
D920_01448
Bacterial transferase hexapeptide repeat protein; KEGG: efc:EFAU004_02193 4.2e-66 Carbonic anhydrase/acetyltransferase.
     
 0.997
rnj
Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.995
D920_01451
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0356 family.
       0.992
D920_02213
ABC transporter, ATP-binding protein; KEGG: lbh:Lbuc_2056 3.9e-230 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.981
D920_01491
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the HesB/IscA family.
       0.951
D920_01153
ABC transporter, ATP-binding protein; KEGG: dca:Desca_0391 7.3e-126 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.941
D920_01313
Methyltransferase domain protein; KEGG: efu:HMPREF0351_10904 4.1e-203 methyltransferase; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.941
D920_02139
KEGG: llt:CVCAS_0296 3.2e-180 ydbA; multidrug/protein/lipid ABC transporter, ATP-binding and permease protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.941
D920_03026
ABC transporter, ATP-binding protein; KEGG: efi:OG1RF_10668 3.2e-210 ndvA; ABC superfamily ATP binding cassette transporter, membrane protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.941
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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