Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01453Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (168 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.936
D920_00772
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.915
D920_01770
KEGG: efc:EFAU004_00424 0. ABC transporter ATP-binding protein/permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.900
D920_00773
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.888
D920_01451
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0356 family.
       0.878
rnj
Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.878
D920_02496
Hypothetical protein.
     
 0.876
D920_00565
Hypothetical protein; KEGG: ccv:CCV52592_1824 2.0e-07 phosphoglycerate kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.856
D920_00563
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.852
D920_00770
KEGG: efc:EFAU004_01774 4.6e-243 glycerophosphodiester phosphodiesterase family protein K01126; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.839
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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