Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
D920_01482Ser/Thr phosphatase family protein; KEGG: zpr:ZPR_1689 0.0022 phosphodiesterase/alkaline phosphatase D-like protein; K01113 alkaline phosphatase D; Psort location: Cytoplasmic, score: 7.50. (355 aa)    
Predicted Functional Partners:
D920_00308
Putative ATP synthase F0, A subunit; KEGG: sea:SeAg_B1257 8.7e-11 leucine-rich repeat protein; K15353 E3 ubiquitin-protein ligase SspH2; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.990
D920_00135
YD repeat protein; KEGG: phu:Phum_PHUM617500 0.0010 type II transmembrane protein, putative; Psort location: Cellwall, score: 9.20.
  
  
 0.970
D920_00217
Peptidase, M23 family; KEGG: efu:HMPREF0351_12843 1.6e-185 lysozyme; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.970
D920_00307
Phage tail component protein.
  
   0.961
D920_02148
Muramidase-2; KEGG: efc:EFAU004_02584 5.0e-269 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.98.
   
   0.957
D920_02449
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; KEGG: efc:EFAU004_01007 5.5e-128 N-acetylmuramoyl-L-alanine amidase; Psort location: CytoplasmicMembrane, score: 8.77.
   
   0.957
D920_00786
Asparagine synthase; KEGG: efu:HMPREF0351_11718 0. asnB; asparagine synthase K01953.
       0.951
D920_00149
Hypothetical protein; KEGG: edi:EDI_048910 0.0071 intracellular protein transport protein USO1.
     
 0.934
D920_00138
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
 
 0.929
D920_01294
N-acetylmuramoyl-L-alanine amidase; KEGG: llt:CVCAS_0201 8.7e-67 yccB; glycoside hydrolase family protein.
  
    0.929
Your Current Organism:
Enterococcus faecalis 13SDW01
NCBI taxonomy Id: 1260356
Other names: E. faecalis 13-SD-W-01, Enterococcus faecalis 13-SD-W-01
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